Table 1 Expression-invariant genes in E. coli during DNA damage as identified by the DP scheme and used for moose 2
Gene | Product | Process/Function |
|---|---|---|
cysG a | uroporphyrin III C-methyltransferase | Other |
dnaG | DNA primase | DNA replication |
dtpB | dipeptide/tripeptide:H+ symporter DtpB | Transport |
ftsX | Cell division protein ftsX | Cell division |
ftsY | Cell division protein ftsY | Cell division |
glyY | tRNAglyY | Translation |
gyrB | DNA gyrase, subunit B | DNA replication |
hcaT a | putative transport protein, major facilitator superfamily (MFS) | Transport |
idnT a | L-idonate / 5-ketogluconate / gluconate transporter IdnT | Transport |
ihfB a | integration host factor (IHF), beta subunit | Transcription |
lhr | member of ATP-dependent helicase superfamily II | DNA replication |
mutM | formamidopyrimidine DNA glycosylase | DNA repair |
mutY | A/G-specific adenine glycosylase | DNA repair |
ndk | nucleoside diphosphate kinase | Other |
nfuA | iron-sulfur cluster scaffold protein | Other |
pnp | polynucleotide phosphorylase monomer | RNA processing |
rbbA | ribosome-associated ATPase | Translation |
rhsB | RhsB protein in rhs element | Other |
rpsU | 30S ribosomal subunit protein S21 | Translation |
rrsA a | 16S ribosomal RNA (rrsA) | Translation |
rrsE | 16S ribosomal RNA (rrsE) | Translation |
rrsG | 16S ribosomal RNA (rrsG) | Translation |
secB | SecB chaperone | Protein localization |
spoT | Guanosine-3′,5′-bis(diphosphate) 3′-pyrophosphohydrolase | Other |
ssrA a | tmRNA | Trans-translation |
tfaR | Rac prophage; predicted tail fiber assembly protein | Prophage |
thrW | tRNAthrW | Translation |
valS | Valyl-tRNA synthetase | Translation |
yedJ | predicted phosphohydrolase | Other |
ynaE | Rac prophage; cold shock protein, function unknown | Prophage |
yphG | conserved protein | Unknown |
zntA | zinc, cadmium and lead efflux system | Transport |
zupT | heavy metal divalent cation transporter ZupT | Transport |