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Table 3 PubMed queries used to calculate precision and recall

From: Caipirini: using gene sets to rank literature

Dataset PubMed Query Abstracts
S-phase "humans"[MeSH Terms] AND ("S Phase"[MeSH Terms] OR "DNA Replication"[MeSH Terms]) NOT ("G1 Phase"[MeSH Terms] OR "G2 Phase"[MeSH Terms] OR "Prophase"[MeSH Terms] OR "Prometaphase"[MeSH Terms] OR "Metaphase"[MeSH Terms] OR "Anaphase"[MeSH Terms] OR "Telophase"[MeSH Terms] OR "Cytokinesis"[MeSH Terms]) AND ("2000/01/01"[PDAT]: "2008/06/31"[PDAT]) 4,240
Not S-phase "humans"[MeSH Terms] AND ("G1 Phase"[MeSH Terms] OR "G2 Phase"[MeSH Terms] OR "Prophase"[MeSH Terms] OR "Prometaphase"[MeSH Terms] OR "Metaphase"[MeSH Terms] OR "Anaphase"[MeSH Terms] OR "Telophase"[MeSH Terms] OR "Cytokinesis"[MeSH Terms]) NOT ("S Phase"[MeSH Terms] OR "DNA Replication"[MeSH Terms]) AND ("2000/01/01"[PDAT]: "2008/06/31"[PDAT]) 4,329
Unknown
phase
"Cell cycle" AND "humans"[MeSH Terms] NOT ("G1 Phase"[MeSH Terms] OR "G2 Phase"[MeSH Terms] OR "Prophase"[MeSH Terms] OR "Prometaphase"[MeSH Terms] OR "Metaphase"[MeSH Terms] OR "Anaphase"[MeSH Terms] OR "Telophase"[MeSH Terms] OR "Cytokinesis"[MeSH Terms] OR "S Phase"[MeSH Terms] OR "DNA Replication"[MeSH Terms]) AND ("2008/01/01"[PDAT]: "2008/06/31"[PDAT]) 2,989