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Table 3 Classification performance of DeepAutoGlioma on external datasets

From: DeepAutoGlioma: a deep learning autoencoder-based multi-omics data integration and classification tools for glioma subtyping

 

Methods

Performance measures (Average of 10 fold cross-validation)

Accuracy [95% CI]

Precision [95% CI]

Recall [95% CI]

F1-score [95% CI]

FPR [95% CI]

Gmean [95% CI]

MCC [95% CI]

LGG

ANN

91.89%

91.20%

88.00%

86.90%

0.06

92.13%

0.83

[91.85–91.93]

[91.15–91.25]

[87.94–88.06]

[86.83–86.97]

[0.02–0.10]

[92.09–92.17]

[0.74–0.92]

CNN

91.38%

91.38%

91.38%

91.38%

0

1

1

[91.34–91.40]

[91.34–91.40]

[91.34–91.40]

[91.34–91.40]

[0–0]

[1–1]

[1–1]

GBM

ANN

84.10%

74.48%

79.48%

76.15%

0.06

90.55%

0.72

[84.01–84.18]

[74.35–74.60]

[79.37–79.58]

[76.03–76.26]

[0.02–0.10]

[90.49–90.60]

[0.58–0.86]

CNN

86.41%

79.87%

83.33%

81.02%

0.05

92.92%

0.76

[86.33–86.49]

[79.75–79.99]

[83.23–83.43]

[80.90–81.13]

[0.01–0.09]

[92.87–92.97]

[0.62–0.90]