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Fig. 14 | BioData Mining

Fig. 14

From: ParticleChromo3D: a Particle Swarm Optimization algorithm for chromosome 3D structure prediction from Hi-C data

Fig. 14

Comparison of Loss Function distribution for 500 KB GM12878 cell Hi-C data. A A boxplot showing the DSCC value distribution of `3D output structure of 500 KB GM12878 cell Hi-C data chromosome 1 to 23 obtained by using loss functions SSE, RMSE, Huber-0.9, Huber -0.5, Huber-0.1, and MSE (B) A Comparison of the average DSCC value of 500 KB GM12878 cell Hi-C data chromosome 1 to 23 obtained by using loss functions SSE, RMSE, Huber-0.9, Huber -0.5, Huber-0.1, and MSE. The Y-axis denotes the DSCC metric score in the range [-1,1], and X-axis denotes the loss function. A higher DSCC value is better XYZ coordinates

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