Table 3 Detection of the known gene interactions in Flybase (E: embryonic, L: larval, P: pupal and A: adulthood)
From: Approximate kernel reconstruction for time-varying networks
(prm,Actn) | (sls,mhc) | (mhc,up) | (sls,Actn) | (sls,up) | (twi,eve) | (up,Actn) | |
|---|---|---|---|---|---|---|---|
AKRON-KFS | \(\checkmark \) (E,L,A) | \(\checkmark \) (A) | \(\checkmark \) (L,P,A) | \(\checkmark \) (E,P,A) | \(\checkmark \) (E,L,P,A) | \(\checkmark \) (E,L) | \(\checkmark \) (E) |
AKRON-KF | \(\checkmark \) (E,L,A) | \(\checkmark \) (A) | \(\checkmark \) (L,P,A) | \(\checkmark \) (E,P,A) | \(\checkmark \) (E,L,P,A) | \(\checkmark \) (E,L) | \(\checkmark \) (E) |
LASSO-Kalman [13] | \(\checkmark \) (E,L,P) | \(\checkmark \) (E,L) | \(\checkmark \) (E,L,P) | \(\checkmark \) (E,L,P) | \(\checkmark \) (E,L,P) | \(\checkmark \) (E,L,P,A) | \(\checkmark \) (E,L,P,A) |
SMURC [4] | \(\checkmark \) (A) | \(\checkmark \) (A) | \(\checkmark \) (L) | \(\checkmark \) (L) | \(\checkmark \) (E) | \(\checkmark \) (P) | × |
MDL [20] | \(\checkmark \) | \(\checkmark \) | × | × | × | \(\checkmark \) | × |
Random graph model [9] | × | × | \(\checkmark \) (E,L,P,A) | \(\checkmark \) (P,A) | \(\checkmark \) (E,L,P,A) | × | × |
Dyn. Bayes. netw. [7] | × | \(\checkmark \) (E,L,P,A) | × | × | × | × | × |
Nonpar. Bayes. [8] | × | × | × | × | × | \(\checkmark \) (E) | × |