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Table 1 Results on simulated networks

From: Approximate kernel reconstruction for time-varying networks

  

AKRON-KF

AKRON-KFS

  

δ=1

δ=2

δ=3

δ=1

δ=2

δ=3

err

9×11×4

2.27/131.42

1.83/119.78

2.74/128.54

0.68/133.65

1.38/122.99

1.21/128.05

 

9×25×4

7.86/62.42

25.49/58.88

16.84/63.87

1.72/64.72

8.99/69.45

4.85/68

 

9×50×4

17.06/18.06

10.92/18.25

4.94/18.81

7.11/22.02

12.59/21.35

2.74/22.47

acc

9×11×4

97.52/57.6

98.57/54.87

98.59/56.06

98.23/58.28

98.53/57.98

99.33/57.04

 

9×25×4

96.31/63.25

97.49/65.17

98.17/65.43

97.82/77.12

98.84/77.23

99.46/78.54

 

9×50×4

97.79/85.74

98.87/85.35

99.22/85.05

98.31/93.99

99.05/93.99

99.52/93.9

sen

9×11×4

98.52/67.25

98.92/65.69

98.62/66.22

99.1/65.89

98.68/65.29

99.34/64.98

 

9×25×4

98.69/89.51

98.7/90.61

98.95/91.67

99.28/89.48

99.37/89.41

99.65/90.18

 

9×50×4

99.32/98.73

99.59/98.78

99.67/98.72

99.48/98.27

99.63/98.24

99.78/98.23

spe

9×11×4

96/45.58

97.96/41.55

98.55/43.94

96.83/43.19

98.29/42.53

99.3/42.17

 

9×25×4

82.55/17.32

89.28/17.79

92.33/19.42

88.46/20.71

94.97/20.01

98.05/22.18

 

9×50×4

48.16/7.17

68.95/6.95

78.78/6.31

57.77/9.37

73.93/8.17

87.62/7.72

mcc

9×11×4

94.6/6.1

95.23/11.33

97.17/10.56

96.7/12.95

97.46/8.63

97.52/8.61

 

9×25×4

84.74/12.08

89.1/13.45

92.88/11.88

90.76/7.92

97.76/8.76

95.47/10.86

 

9×50×4

54.44/13.33

65.12/13.99

81.71/13.3

58.54/7.05

79.02/9.81

86.51/8.11

  1. Each entry in the table reports two numbers separated by “/”. The number on the left is the result of AKRON and the number on the right is the result of Lasso-KF. The simulation is performed with a 15% network density. The dimensions A×B×C can be interpreted as A samples with B genes across C timestamps