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Table 1 Comparison of the characteristics of popular microarray analysis tools

From: DNA microarray integromics analysis platform

Platform characteristic WebArrayDB [11] ArrayMining [12] Babelomics [13] DNA Microarray integromics analysis platform
miRNA-mRNA target site recognition - - - +
Integration of transcriptomics and lipidomics - - - +
Analysis of genetic variation - - +3 -
Functional profiling    +1 +2
Conditional analysis of gene expression based on ANN - - - +
Imports and exports data to EBI databases - - - +
Teamwork and collaboration - - - +
License and source code availability GNU General Public License Free for academic and non-commercial use; source code not available Free; source code available Free for academic and non-commercial use; source code available
  1. 1Includes text mining, knowledge- and network-based annotations and gene set enrichment analysis; 2includes knowledge- and network-based annotations and gene set enrichment analysis; 3includes association analysis and genotype stratification