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Figure 1 | BioData Mining

Figure 1

From: Graph representation of high-dimensional alpha-helical membrane protein data

Figure 1

Motif Examples. In the bacteriorhodopsin trimer (PDB-Id: 1brr), seven motif examples are present. Each motif can be written in a regular-expression like XYn, where X and Y are amino acids separated by n -1 highly variable positions. For example the LG5 motif occurrence (highlighted in red) corresponds to a pair of leucine (Leu) and glycine (Gly) residues which are separated by four amino acids.

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BioData Mining

ISSN: 1756-0381