Skip to main content

Table 1 Broad Dataset with Flanking Positions Identified by A, G, C, and T Character

From: Multifactor dimensionality reduction analysis identifies specific nucleotide patterns promoting genetic polymorphisms

SNP Count nucleotide positions Testing accuracy. P- value X 2
A→G 371 +1 0.558 0.05 0.001
C→A 84 +1 0.613 0.05 0.001
C→G 95 +1 0.521 <0.01 0.001
G→A 322 +1 0.571 0.02 0.001
  1. MDR analysis of SNP flanking regions where upstream 3' to SNP site equals positions -10 through -1 and 5' region from the SNP site extending downstream equals position +1 through +10. All positions where evaluated with regard to nucleotide identity, i.e. adenine, cytosine, guanine, and thymine.