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Table 2 Genes corresponding to the most statistically significant clusters found in the case study.

From: Fast Gene Ontology based clustering for microarray experiments

Cluster

Genes

G1

PDCL3 MAGED1 (two probe sets) PRKCE PRDX1 CLIC4 MRPS23

 

GABARAPL3

G2

CBR3 RANBP17 NBEA FVT1

G3

LRRC47 WARS

G4

NANOGP8 ZNF215 POU5F1 MYBL2 L1TD1 CITED2 TCEA2 SMARCAD1

 

MKI67IP CPSF4 PPFIBP2 WDSUB1 PPP3CA ISG20L1 TIPARP CEP290

 

DPPA4 TJP2 NLRP7

G5

CTH GLO1

G6

PLAU PPAP2A

G7

TLR5 OR5R1 TMEM106C IFITM1 PCDHB5 PCDHB11 AC069513.28 PLK3

G8

SLC22A17 FLVCR1

G9

PDGFA IGSF21 GDF3 CCDC80 GAL TF

  1. MAGED1 has two distinct differentially expressed probe sets. Genes are ordered from bottom to top in Figure 1. For example, the genes in cluster G 1 in Figure 1 are, from bottom to top, PDCL3, two probe sets for MAGED1, PRKCE, etc.
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ISSN: 1756-0381