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Table 1 Final Pareto optimal pipelines from an example run of the 18 QTL dataset (also depicted in Fig. 2A). Pipelines in bold correspond to pipelines with arrows in Fig. 2A which are optimized in both test R2 and DS (Pareto efficient). HP = Hyperparameter. The first pipeline (row), with * in Regressor column (LR), corresponds to the pipeline with a star in Fig. 2A

From: Automated quantitative trait locus analysis (AutoQTL)

1st Operator (HP)

2nd Operator (HP)

3rd Operator (HP)

Regressor

R2

DS

-

-

-

LR*

0.086

3.58

-

-

-

LR

0.078

3.59

Recessive

VT (0.05)

-

LR

0.061

4.90

VT (0.05)

VT (0.35)

Recessive

LR

0.058

5.51

Recessive

Overdominance

GF (0.30)

LR

0.027

8.82