Table 7 t-SNE Parameter space exploration

From: Polygenic risk modeling of tumor stage and survival in bladder cancer

	Available	Reduced parameter set			All 5 parameters
Pipeline	Combinat.	R\(^2\)	Selected parameters	Regressor	R\(^{2}\)	Regressor
Uniform	615	0.968	\(\theta\), LR, Metr, Perp	ETR^a	0.961	ETR
Log-z	601	0.835	Metr, Perp	Bagging	0.814	ETR
Normal	608	0.884	LR, Metr, Perp	Voting^b	0.821	ETR

^aMeta estimator fitting 100 randomized decision trees
^bAveraged individual predictions of Bagging, Random Forest and Gradient Boosting regressors

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ISSN: 1756-0381

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