Table 5 Proposed network performance with log normalization

From: Integrating pathway knowledge with deep neural networks to reduce the dimensionality in single-cell RNA-seq data

				F1			PRECISION			RECALL
Architecture	Number of nodes 2nd layer	Accuracy	Balanced accuracy	Macro	Micro	Weighted	Macro	Micro	Weighted	Macro	Micro	Weighted
Dense	–	0.938	0.839	0.859	0.938	0.934	0.923	0.938	0.938	0.839	0.938	0.938
Pathways	–	0.936	0.844	0.861	0.936	0.933	0.922	0.936	0.938	0.844	0.936	0.936
Pathways	100	0.930	0.834	0.847	0.930	0.926	0.901	0.930	0.932	0.834	0.930	0.930

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ISSN: 1756-0381

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