Table 8 Percent of reading systems’ extractions by different reaction types in INDRA DB HCM model
Reaction types | ISI/AMR (%) | RLIMS-P (%) | Eidos (%) | TRIPS/DRUM (%) | Sparser (%) | REACH (%) |
|---|---|---|---|---|---|---|
Activation, 2 elements | 0.01 | 0.00 | 0.20 | 0.05 | 22.57 | 77.16 |
Activation, when binding | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 100.00 |
Activation, when carrying | 0.00 | 0.00 | 100.00 | 0.00 | 0.00 | 0.00 |
Activation, when occurring | 0.00 | 0.00 | 100.00 | 0.00 | 0.00 | 0.00 |
Autophosphorylation | 0.00 | 0.00 | 0.00 | 1.57 | 98.43 | 0.00 |
Binding inhibits | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 100.00 |
Binding, 2 elements | 0.04 | 0.00 | 0.00 | 0.03 | 58.36 | 41.57 |
Binding, more than 2 elements | 0.00 | 0.00 | 0.00 | 0.00 | 99.07 | 0.93 |
Complex | 0.00 | 0.00 | 100.00 | 0.00 | 0.00 | 0.00 |
Decreasing the amount, 2 elements | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 100.00 |
Dephosphorylation, 2 elements | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 100.00 |
Dephosphorylation, 2 elements, precise | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 100.00 |
Increasing the amount, 2 elements | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 100.00 |
Inhibition observed in | 0.00 | 0.00 | 100.00 | 0.00 | 0.00 | 0.00 |
Inhibition, 2 elements | 0.01 | 0.00 | 0.53 | 0.17 | 3.27 | 96.02 |
Inhibition, when binding | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 100.00 |
Object dephosphorylated | 0.00 | 0.00 | 0.00 | 0.00 | 99.95 | 0.05 |
Object phosphorylated | 0.00 | 18.80 | 0.00 | 0.71 | 80.25 | 0.24 |
Object phosphorylated, precise | 0.00 | 9.15 | 0.00 | 0.00 | 90.79 | 0.06 |
Object produced | 0.00 | 0.00 | 0.00 | 60.00 | 0.00 | 40.00 |
Phosphorylation increases amount | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 100.00 |
Phosphorylation, 2 elements | 0.05 | 5.08 | 0.00 | 0.23 | 43.26 | 51.38 |
Phosphorylation, 2 elements, precise | 0.00 | 1.51 | 0.00 | 0.00 | 43.22 | 55.28 |
Subject leads to dephosphorylation of object | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 100.00 |
Subject leads to phosphorylation of object | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 100.00 |
Translocation, destination precise | 0.00 | 0.00 | 0.00 | 0.08 | 82.95 | 16.97 |
Translocation, starting point precise | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 100.00 |
Ubiquitination, 2 elements | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 100.00 |