Table 1 Table of indels (Deletion - D, insertion - I) found in at least two sequences
From: Indels in SARS-CoV-2 occur at template-switching hotspots
Start Pos | Length | Type | # Seqs | Countries |
|---|---|---|---|---|
222 | 1 | D | 2 | USA, England |
508 | 15 | D | 2 | USA |
510 | 9 | D | 5 | USA, France, Scotland, England |
515 | 6 | D | 18 | Belgium, United, USA, Greece, Denmark, Australia, England |
515 | 3 | D | 6 | USA, Australia |
518 | 3 | D | 4 | Spain, USA, Netherlands, Denmark |
669 | 3 | D | 9 | India, USA |
686 | 9 | D | 55 | Sweden, Belgium, USA, Saudi, Canada, Israel, Spain, Portugal, |
Netherlands, Iceland, Denmark, Turkey, France, Australia, England | ||||
729 | 9 | D | 5 | Sichuan, Wuhan |
1431 | 3 | D | 2 | USA, Yunnan |
1605 | 3 | D | 332 | Spain, Portugal, Russia, Latvia, Germany, Northern, Australia, |
England, Belgium, USA, Netherlands, Iceland, Denmark, Chile, Wales, | ||||
Greece, France, Sweden, Taiwan, Finland, Scotland, Pakistan, New | ||||
3333 | 3 | D | 23 | Kazakhstan |
6501 | 3 | D | 2 | England |
6506 | 3 | D | 2 | Iceland |
6510 | 6 | D | 2 | India, Australia |
6518 | 6 | D | 2 | USA |
11074 | 3 | I | 16 | United, Portugal, Switzerland, Taiwan, Jamaica, Scotland, Jordan, Australia |
12620 | 3 | D | 2 | Netherlands |
14865 | 2 | D | 12 | Wuhan |
18412 | 1 | D | 6 | Wuhan |
20423 | 3 | D | 2 | USA, Portugal |
20965 | 1 | D | 4 | Wuhan |
21991 | 3 | D | 14 | Belgium, India, USA, Saudi, Netherlands, Slovenia, Jordan, England |
25532 | 3 | D | 2 | USA, France |
26159 | 2 | D | 2 | USA |
26351 | 6 | D | 2 | India |
27701 | 3 | D | 2 | England |
27848 | 382 | D | 13 | Singapore |
27910 | 345 | D | 2 | Bangladesh |
28090 | 6 | D | 3 | USA, Iceland, Australia |
28254 | 1 | D | 6 | Wuhan |
29593 | 2 | I | 2 | USA |
29686 | 1 | I | 7 | Iceland, Thailand, England |
29723 | 44 | D | 2 | Argentina |
29726 | 1 | D | 2 | England |
29756 | 7 | D | 4 | India, USA, Netherlands, England |
29760 | 5 | D | 2 | USA |
29761 | 2 | D | 5 | USA, Australia |
29788 | 2 | D | 3 | England |