Table 1 Table of indels (Deletion - D, insertion - I) found in at least two sequences
From: Indels in SARS-CoV-2 occur at template-switching hotspots
| Start Pos | Length | Type | # Seqs | Countries |
|---|---|---|---|---|
| 222 | 1 | D | 2 | USA, England |
| 508 | 15 | D | 2 | USA |
| 510 | 9 | D | 5 | USA, France, Scotland, England |
| 515 | 6 | D | 18 | Belgium, United, USA, Greece, Denmark, Australia, England |
| 515 | 3 | D | 6 | USA, Australia |
| 518 | 3 | D | 4 | Spain, USA, Netherlands, Denmark |
| 669 | 3 | D | 9 | India, USA |
| 686 | 9 | D | 55 | Sweden, Belgium, USA, Saudi, Canada, Israel, Spain, Portugal, |
| Netherlands, Iceland, Denmark, Turkey, France, Australia, England | ||||
| 729 | 9 | D | 5 | Sichuan, Wuhan |
| 1431 | 3 | D | 2 | USA, Yunnan |
| 1605 | 3 | D | 332 | Spain, Portugal, Russia, Latvia, Germany, Northern, Australia, |
| England, Belgium, USA, Netherlands, Iceland, Denmark, Chile, Wales, | ||||
| Greece, France, Sweden, Taiwan, Finland, Scotland, Pakistan, New | ||||
| 3333 | 3 | D | 23 | Kazakhstan |
| 6501 | 3 | D | 2 | England |
| 6506 | 3 | D | 2 | Iceland |
| 6510 | 6 | D | 2 | India, Australia |
| 6518 | 6 | D | 2 | USA |
| 11074 | 3 | I | 16 | United, Portugal, Switzerland, Taiwan, Jamaica, Scotland, Jordan, Australia |
| 12620 | 3 | D | 2 | Netherlands |
| 14865 | 2 | D | 12 | Wuhan |
| 18412 | 1 | D | 6 | Wuhan |
| 20423 | 3 | D | 2 | USA, Portugal |
| 20965 | 1 | D | 4 | Wuhan |
| 21991 | 3 | D | 14 | Belgium, India, USA, Saudi, Netherlands, Slovenia, Jordan, England |
| 25532 | 3 | D | 2 | USA, France |
| 26159 | 2 | D | 2 | USA |
| 26351 | 6 | D | 2 | India |
| 27701 | 3 | D | 2 | England |
| 27848 | 382 | D | 13 | Singapore |
| 27910 | 345 | D | 2 | Bangladesh |
| 28090 | 6 | D | 3 | USA, Iceland, Australia |
| 28254 | 1 | D | 6 | Wuhan |
| 29593 | 2 | I | 2 | USA |
| 29686 | 1 | I | 7 | Iceland, Thailand, England |
| 29723 | 44 | D | 2 | Argentina |
| 29726 | 1 | D | 2 | England |
| 29756 | 7 | D | 4 | India, USA, Netherlands, England |
| 29760 | 5 | D | 2 | USA |
| 29761 | 2 | D | 5 | USA, Australia |
| 29788 | 2 | D | 3 | England |