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Table 3 Total runtime [s] and the total number of explored rules of exhaustive refinement for DOT, DISC, and m2801 dataset

From: Finding semantic patterns in omics data using concept rule learning with an ontology-based refinement operator

Dataset

Feature selection

ACC score

F1 score

AUC score

  

total time

# of rules

total time

# of rules

total time

# of rules

DOT

FS_atLeastOne

33,800.529

62,192,307

12,807.090

21,977,679

22,814.993

37,604,456

 

FS_onlySig

15,849.761

30,991,466

5,049.444

8,075,976

9,042.203

15,672,577

 

FS_sigAtLeastOne

33,638.549

61,912,986

12,743.265

21,674,132

22,726.459

37,176,099

DISC

FS_atLeastOne

996.587

10,681,537

881.007

11,017,701

2,214.819

38,874,717

 

FS_onlySig

623.078

6,125,970

524.412

6,041,883

1,323.920

21,618,242

 

FS_sigAtLeastOne

963.291

9,406,704

817.055

9,484,372

2,145.880

37,172,305

m2801

FS_atLeastOne

53,163.030

153,778,914

6,573.700

26,766,658

12,766.542

64,329,543

 

FS_onlySig

29,641.080

86,150,004

3,873.421

14,168,195

6,741.368

29,298,233

 

FS_sigAtLeastOne

53,019.570

153,255,327

6,431.049

25,255,830

12,391.710

59,322,805