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Table 4 Tag SNPs number associated to causal variants for different LD(r2) values

From: Confounding of linkage disequilibrium patterns in large scale DNA based gene-gene interaction studies

Causal

Number of tag SNP at LD(r2) value:

SNP

r2=0.20

r2=0.45

r2=0.55

r2=0.65

r2=0.75

DSL 1

60

2

2

1

1

DSL 2 A

115

114

114

111

98

DSL 2 B

110

110

109

107

107

DSL 2 C

81

80

80

78

78

DSL 2 D

76

48

31

31

24