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Table 1 Denomination and short description of the 27 features of the dataset for individual residues classification

From: Application of an interpretable classification model on Early Folding Residues during protein folding

Feature Description
e Computed energy values
ePred Predicted energy values
SecSize Size of the surrounding secondary structure elements
LF Fraction of surrounding unordered secondary structure elements
Rasa Relative accessible surface area
PlipLC Absolute count of local PLIP contacts
PlipHbLC Absolute count of local PLIP hydrogen bonds
PlipHpLC Absolute count of local PLIP hydrophobic interactions
PlipBbLC Absolute count of local PLIP backbone contacts
PlipLR Absolute count of long-range PLIP contacts
PlipHbLR Absolute count of long-range PLIP hydrogen bonds
PlipHpLR Absolute count of long-range PLIP hydrophobic interactions
PlipBbLR Absolute count of long-range PLIP backbone contacts
PlipBN Betweenness using all PLIP contacts
PlipCL Closeness using all PLIP contacts
PlipCC Clustering coefficient using all PLIP contacts
PlipHbBN Betweenness using PLIP hydrogen bonds
PlipHbCL Closeness using PLIP hydrogen bonds
PlipHbCC Clustering coefficient using PLIP hydrogen bonds
PlipHpBN Betweenness using PLIP hydrophobic interactions
PlipHpCL Closeness using PLIP hydrophobic interactions
PlipHpCC Clustering coefficient using PLIP hydrophobic interactions
ConvBN Betweenness using the distance-based contact definition
ConvCL Closeness using the distance-based contact definition
ConvCC Clustering coefficient using the distance-based contact definition
PlipNC Distinct neighborhood count using all PLIP contacts
ConvNC Distinct neighborhood count using the distance-based contact definition
  1. References to these features are given in italic font