Table 3 Average run time for each GSA method
| Method | Ave Run Time |
|---|---|
| SAFE |
Default Global Statistics • aveDiff: 18 mins • Pearson: 16 mins • FET: 17 mins • Wilcoxon: 17 mins 10,000 Permutations: 149 mins 10,000 Bootstraps: 134 mins |
| sigPathway | 4:08 mins |
| GSEA |
Competitive: 39:58 mins Self-Contained: 34:28 mins |
| CAMERA | 00:15 mins |