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Fig. 6 | BioData Mining

Fig. 6

From: Gene set analysis methods: a systematic comparison

Fig. 6

Power of Overlap Pathways. Statistical power for results with recommended methods (CAMERA, GSEA with user defined FDR q-value and sigPathway) for those pathways with genes overlapping the targeted pathway and denoted by the overlap proportion. Only proportion of differential expression parameter (π) values of 0.1 and 1 are shown here, while the others are displayed in Additional file 1: Figures S7 and S8. All power values are shown as a significance value of 0.05. a The KRAS.PROSTATE_UP.V1_DN pathway has been differentially expressed. b The TGF-β SIGNALING pathway has been differentially expressed

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BioData Mining

ISSN: 1756-0381