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Table 3 Performance of different GLM methods for logistic regression over 100 simulations, where ANSF: Average number of selected features; trMSE: Test Average square root of mean squared error; \(|\hat { {\beta } }- {\beta } | =\sum _{i} |\hat { {\beta } }_{i} - {\beta }_{i}|\): average absolute bias when comparing true and estimated parameters

From: Sparse generalized linear model with L 0 approximation for feature selection and prediction with big omics data

 

PMS

L 1

SparseReg

L 0ADRIDGE

   

SCAD

MC+

 
 

trMSE

0.0474(±.0035)

0.0469(±.0039)

0.0456(±.0042)

0 . 0 4 3 4 ( ± . 0 0 2 8 )

N =100

\(|\hat { {\beta }} - {\beta } |\)

0.2984(±.1262)

0.3129(±.1249)

0.1625(±.0752)

0 . 0 6 8 2 ( ± . 0 4 1 6 )

P =100

ANSF

17.10(±9.32)

18.35(±10.185)

10.410(±6.174)

3 . 3 3 0 ( ± . 7 7 9 )

 

PTM

0%

0%

2%

8 1 %

 

FDR

77.7%

78.4%

62.4%

6 . 6 %

 

trMSE

0.0517(±.0045)

0.0496(±.0046)

0.0468(±.0045)

0 . 0 4 3 4 ( ± . 0 0 3 0 )

N =100

\(|\hat { {\beta }} - {\beta } |\)

0.5968(±.2599)

0.6465(±.2205)

0.2818(±.1030)

0 . 0 7 5 4 ± . 0 6 0 0 )

P=1000

ANSF

50.92(±39.974)

73.030(±40.792)

24.80(±13.314)

3 . 4 1 ( ± 1 . 0 6 5 )

 

PTM

0%

0%

0%

8 0 %

 

FDR

90.5%

93%

83.9%

7 . 3 %

  1. PMS: Performance Measures. PTM: Percentage of true models. FDR: False discovery rate. The values in boldface indicate the best performance