Table 5 Enrichment of biological terms in differential correlated genes between breast cancer subtypes
From: Metrics to estimate differential co-expression networks
Analysis | Cluster Terms | Gene Counts Range | DAVID Enrich Score | *Benjamini p-Value |
|---|---|---|---|---|
Overall | Signal peptide, Glycoprotein, Disulfide bond | 155–199 | 6.18 | 1.3e-5 |
Membrane | 134–280 | 3.8 | 2.5e-3 | |
Fibronectin type III, FN3 | 17–21 | 3.41 | 8.7e-3 | |
Pleckstrin homology domain | 22–30 | 3.41 | 2.4e-2 | |
Voltage-gated ch, Ion channel & Transport | 15–33 | 2.96 | 6.3e-3 | |
Immunoglobulin I-set, subtype 2, domains | 18–34 | 2.91 | 4.0e-3 | |
Innate immunity | 20–25 | 1.96 | 1.1e-2 | |
LumA-LumB | Mitosis, Cell Division, Cell Cycle | 8–10 | 2.87 | 2.0e-3 |
Secreted, Glycoprotein, Signal | 21–30 | 2.56 | 7.4e-3 | |
Basal-Her2 | Palmitate, Lipoprotein, Receptor | 6–8 | 1.76 | 1.1e-1 |
NAD, Retinol metabolism | 3–4 | 1.56 | 1.3e-1 |