Metrics to estimate differential co-expression networks

Table 3 Observed positive genes from the Colon-based controlled dataset

Stages	M1.1	M1.3	M1.5	M2	M3.1	M3.3	M3.5	M4	M5	M6
N-T1	284	140	89	328	347	229	156	401	401	350
T1-T2	290	125	71	331	333	228	157	403	406	346
T2-T3	264	125	69	307	302	235	149	377	374	344
Sensitivity at 33%	0.56	0.26	0.15	0.64	0.65	0.46	0.31	0.79	0.79	0.69
N-T2	302	137	89	346	448	237	150	438	437	350
T1-T3	283	129	71	323	444	222	154	430	427	343
Sensitivity at 66%	0.59	0.27	0.16	0.67	0.89	0.46	0.3	0.87	0.86	0.69
N-T3	307	139	87	354	448	236	163	448	450	348
Sensitivity at 100%	0.61	0.28	0.17	0.71	0.90	0.47	0.33	0.90	0.90	0.70
Global Sensitivity	0.58	0.27	0.16	0.66	0.77	0.46	0.31	0.83	0.83	0.69
Relative Sensitivity	0.70	0.33	0.19	0.80	0.93	0.55	0.37	1.00	1.00	0.83

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