Methods | P | TP | FP | FN | Precision | Recall | F-score | Nominal p-value | Adjusted p-value |
---|---|---|---|---|---|---|---|---|---|
HRNN | 5 | 5.6 | 3.4 | 4.7 | 0.62 | 0.54 | 0.57 | Â | Â |
 | 10 | 6.4 | 12.8 | 12.6 | 0.33 | 0.33 | 0.33 |  |  |
 | 20 | 11.2 | 30.5 | 28.4 | 0.26 | 0.28 | 0.27 |  |  |
 | 30 | 10.9 | 50.3 | 46.1 | 0.18 | 0.19 | 0.18 |  |  |
TD-ARACNE | 5 | 6.60 | 6.9 | 3.7 | 0.50 | 0.64 | 0.54 | 0.60 | 1 |
 | 10 | 9.3 | 35.7 | 9.7 | 0.21 | 0.50 | 0.28 | 0.16 | 0.64 |
 | 20 | 14.5 | 129.5 | 25.1 | 0.10 | 0.37 | 0.15 | 3.0×10−4 | 1.2×10−3 |
 | 30 | 12 | 162 | 45 | 0.07 | 0.20 | 0.09 | 2.0×10−5 | 8.0×10−5 |
HCC-CLINDE | 5 | 3.1 | 1.8 | 7.2 | 0.65 | 0.29 | 0.39 | 7.0×10−4 | 2.8×10−3 |
 | 10 | 3.3 | 4.4 | 15.7 | 0.46 | 0.17 | 0.24 | 0.05 | 0.2 |
 | 20 | 4.1 | 9.4 | 35.5 | 0.29 | 0.10 | 0.15 | 0.007 | 0.028 |
 | 30 | 3.4 | 13.0 | 53.6 | 0.21 | 0.05 | 0.09 | 0.002 | 0.008 |
TSNI | 5 | 10.3 | 14.7 | 0.0 | 0.41 | 1 | 0.58 | 0.91 | 1 |
 | 10 | 16.9 | 71.1 | 2.1 | 0.19 | 0.89 | 0.31 | 0.60 | 1 |
 | 20 | 17.6 | 160.4 | 22.0 | 0.09 | 0.44 | 0.16 | 4.0×10−4 | 1.6×10−3 |
 | 30 | 10 | 158 | 47 | 0.06 | 0.17 | 0.08 | 2.0×10−4 | 8.0×10−4 |
ebdbNet | 5 | 4.4 | 6.1 | 5.9 | 0.43 | 0.43 | 0.41 | 0.008 | 0.032 |
 | 10 | 4.8 | 20.2 | 14.2 | 0.19 | 0.25 | 0.20 | 0.004 | 0.016 |
 | 20 | 6.2 | 55.80 | 33.4 | 0.10 | 0.15 | 0.12 | 5.0×10−5 | 2.0×10−4 |
 | 30 | 3.8 | 59.2 | 53.2 | 0.06 | 0.06 | 0.06 | 7.9×10−5 | 3.1×10−4 |