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Table 4 List of classification experiments

From: Feature analysis for classification of trace fluorescent labeled protein crystallization images

Exp ID

Tasks

No. of experiments 3

1

Run all classifiers for 511 feature set (5 classifiers with/without normalization)

2 * 5 * 511* 1 = 5110

2

Run the best classifier 5 times and take the average for the best 70-feature set (RF)

1 * 1 * 64 * 5 = 320

3

Run classifiers PCA for 10,20,..,50 features

1 * 5 * 5 * 2= 50

4

Run classifiers using RF feature selection (10,20,...,50)

1 * 5 * 5* 2 = 50

5

Run BYS, DT and RF (with and without normalization, with graph features) for crystal sub categories

2 * 3 * 511 * 1 = 3066

6

Run RF, DT and BYS classifiers with and without normalization for likely-lead subcategories

2 * 3 * 1 * 1 = 6

7

Run RF, DT and BYS classifiers with and without normalization for non-crystal subcategories

2 * 3 * 1 * 1 = 6

8

Calculate training and testing time of the random forest for the largest feature

1 * 1 * 1 * 5 = 5

9

Calculate timings for feature extraction of an image

1 * 1 * 11 *1 = 11

 

Total number of experiments

8624