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Fig. 2 | BioData Mining

Fig. 2

From: Rapid development of entity-based data models for bioinformatics with persistence object-oriented design and structured interfaces

Fig. 2

Implemented framework. Our implementation of the proposed framework utilizes Java as the development environment, EclipseLink as the JPA provider and Apache Derby as the database manager. Parsing layers were based on J3D, jsoup, Apache Commons and Org.w3c libraries. We implemented structured interfaces to various databases including MalaCards, Biomodels and several NCBI’s data sets

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