| Functional SNPs in case data | Functional SNPs in control data | Weight (W) | No. datasets for each W | Total SNPs | Sample size |
---|---|---|---|---|---|---|
Main effect | SNP A | SNP A | 0.1, 0.5, 0.9 | 10 | 100, 500 | 4000 |
SNP A, B, C, D | SNP A, B, C, D | 0.1, 0.5, 0.9 | 10 | 100, 500 | 4000 | |
Interaction effect | SNP A * SNP B | None | 0.1, 0.5, 0.9 | 10 | 100, 500 | 4000 |
SNP A * SNP B | SNP W * SNP X | 0.1, 0.5, 0.9 | 10 | 100, 500 | 4000 | |
SNP C * SNP D | SNP Y * SNP Z |