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Table 1 Information about the nine causal SNPs under the alternative hypothesis in simulation study 1

From: r2VIM: A new variable selection method for random forests in genome-wide association studies

SNP MAF RR no SNPs strong LD no SNPs moderate LD
11-103959987 0.474 1.3 0 1
22-28469630 0.488 1.3 4 8
17-9807099 0.496 1.3 0 0
1-240799543 0.312 1.5 0 0
7-45984820 0.312 1.5 0 2
5-130104076 0.323 1.5 12 18
14-67463012 0.062 2 2 31
18-34645639 0.062 2 0 1
3-2770509 0.064 2 0 1
  1. Table shows SNP identifier in chromosome and position notation, minor allele frequency (MAF), relative risks (RR) and number of SNPs within a 1 Mb region that are in strong (r 2 > 0.8) or moderate LD (0.3 < r 2 ≤ 0.8)