Table 7 The performance metrics for the proposed approach and other published tools using the independent test set
From: Prediction of donor splice sites using random forest with a new sequence encoding approach
Methods | TPR | TNR | F (α = 1) | F (β = 2) | G-mean | WA | MCC |
|---|---|---|---|---|---|---|---|
MaxEntScan | 0.627 | 0.990 | 0.766 | 0.884 | 0.788 | 0.809 | 0.662 |
MDD | 0.651 | 0.991 | 0.784 | 0.894 | 0.803 | 0.821 | 0.682 |
MM1 | 0.581 | 0.988 | 0.730 | 0.862 | 0.758 | 0.785 | 0.623 |
WMM | 0.415 | 0.986 | 0.581 | 0.764 | 0.640 | 0.701 | 0.488 |
NNSplice | 0.733 | 0.954 | 0.824 | 0.891 | 0.837 | 0.844 | 0.705 |
SpliceView | 0.888 | 0.879 | 0.884 | 0.882 | 0.883 | 0.884 | 0.767 |
Proposed | 0.977 | 0.922 | 0.951 | 0.936 | 0.949 | 0.949 | 0.900 |