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Fig. 2 | BioData Mining

Fig. 2

From: SequenceCEROSENE: a computational method and web server to visualize spatial residue neighborhoods at the sequence level

Fig. 2

SequenceCEROSENE server result page for CAP. Besides presenting visualizations and providing links for downloading generated color encodings, the web servers allows to interact with generated representations. As shown, residues can be highlighted in sequence and structure by either making a selection in the sequence or in the structure as both parts are interconnected. The protein structure viewer is realized using PV [15]. Furthermore, multiple structures can be processed in one submission by uploading an archive file in any popular format. In this example, the structure of E. coli formate dehydrogenase N (PDB-Id: 1kqf) has been uploaded in addition to CAP. Result pages are organized in individually selectable tabs, thus allowing to quickly switch between processed structures. In the case shown here, the results for 1kqf are also available via an additional tab

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BioData Mining

ISSN: 1756-0381