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Table 5 Percent accuracy of the classifiers for each taxonomic unit (10-fold cross validation) on the original data set

From: LAF: Logic Alignment Free and its application to bacterial genomes classification

Level

RIPPER

RIDOR

PART

DMB

SVM

NN

Avg ±std.dev

 

Species

-

-

-

-

-

-

-

 

Genus

54.17

47.67

50.17

48.54

-

73.04

45.60 ±24.2

 

Order

69.82

62.25

67.05

63.78

85.37

85.68

72.32 ±10.5

 

Class

75.08

69.92

71.76

72.05

88.43

89.10

77.72 ±8.7

 

Phylum

75.85

70.99

56.77

71.45

85.93

86.08

74.51 ±8.2

 

Avg ±std.dev

68.73 ±10.0

62.71 ±10.7

61.44 ±9.7

63.96 ±11

64.93 ±43.3

83.48 ±7.1

67.54 ±14.8

 
  1. The best performances are highlighted in bold for each taxon