LAF: Logic Alignment Free and its application to bacterial genomes classification

Table 3 Accuracy (ACC) [%] and computational times (T) [sec] on the order level with different values of K

Data set	Classifier	K=3		K=4		K=5		K=6
		ACC	T	ACC	T [s]	ACC	T	ACC	T
Original	RIPPER	64.50	37.08	69.82	83.53	69.76	203.53	69.92	765.34
Original	RIDOR	61.63	71.17	62.25	320.72	64.19	1509.75	64.75	10320.40
Original	PART	65.37	12.67	67.05	24.58	67.77	70.13	70.02	280.23
Original	SVM	70.69	605.55	85.37	937.32	88.59	1312.52	89.56	2020.60
Original	NN	83.27	9.56	85.67	12.13	86.49	19.34	87.06	114.48
Filtered	RIPPER	98.79	0.82	98.79	1.55	99.27	4.56	98.79	27.76
Filtered	RIDOR	96.12	1.58	99.27	3.05	96.36	26.16	97.33	34.31
Filtered	PART	97.34	0.51	98.31	1.00	97.58	2.28	97.09	23.11
Filtered	SVM	99.56	10.62	99.87	11.58	99.65	13.10	99.68	14.71
Filtered	NN	99.45	1.99	99.93	3.30	99.34	3.70	99.63	4.18
Average	-	83.67	75.2	86.63	139.88	86.90	316.51	87.38	1360.51

ISSN: 1756-0381