Table 7 Top regulators for test cluster K1 predicted by the FDL and the SPF methods in wWormNet
From: On predicting regulatory genes by analysis of functional networks in C. elegans
Seq. IDs | Gene | Function | Â | |
|---|---|---|---|---|
F57B9.6 | inf-1 | Transl.initiation/ RNA transport | Â | |
T05G5.10 | iff-1 | Transl.initiation/ NMD | Â | |
Y71G12B.8 | Y71G12B.8 | RNA helicase/ RNA transport | Â | |
T10C6.14, T10C6.12, T10C6.11, | 38 His genes | Histones | Â | |
F45F2.4, F45F2.12, ZK131.4, | Â | Â | Â | |
ZK131.6, ZK131.8, ZK131.10, | Â | Â | Â | |
K06C4.10, K06C4.11, K06C4.4, | Â | Â | Â | |
K06C4.3, K06C4.12, ZK131.1, | Â | Â | Â | |
K06C4.2, F35H10.1, F17E9.12, | Â | Â | Â | |
F17E9.13, C50F4.7, K03A1.6, | Â | Â | Â | |
C50F4.5, F08G2.2, B0035.9, | Â | Â | Â | |
B0035.7, F07B7.9, F07B7.10, | Â | Â | Â | |
F07B7.4, F07B7.3, F07B7.11, | Â | Â | ||
F54E12.3, F54E12.5, F55G1.11, | Â | Â | Â | |
F55G1.10, F22B3.1,H02I12.7, | Â | Â | Â | |
T23D8.5, T23D8.6, F45F2.3 | Â | Â | Â | |
C41D11.2 | eif-3.H | Transl.initiation | Â | |
F32E10.1 | nol-10 | Nucleolar protein, polyglut. binding | Â | |
F54H12.6 | eef-1B.1 | Elongation factor | Â | |
C01F6.5 | aly-1 | RNA export | Â | |
M163.3 | his-24 | Histones | Â | |
B0564.1 | tin-9.2 | Decay/ NMD | Â | |
Y18D10A.17 | car-1 | Decay/decapping | Â | |
F56D12.5 | vig-1 | RISC component/miRNA binding | Â | |
F26D10.3 | hsp-1 | Splicing | Â | |
R04A9.4 | ife-2 | Transl.initiation | Â | |