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Table 2 COG terms and annotation details in microbial cooperation and bioleaching

From: Interaction networks for identifying coupled molecular processes in microbial communities

COG term At. ferrooxidans At. thiooxidans
  #genes cooperation utilization #genes cooperation utilization
(C) Energy production & conversion 66 7 3 68 6 1
(E) Amino acid transport & metabolism 25 4 0 18 2 0
(H) Coenzyme transport & metabolism 24 0 0 6 0 0
(O) Posttranslational modification, protein turnover & chaperones 32 0 0 26 0 0
(P) Inorganic ion transport & metabolism 62 0 0 29 0 0
(Q) Secondary metabolites biosynthesis, transport & catabolism 12 0 0 9 0 0
  1. Number of species-specific genes for At. ferrooxidans and At. thiooxidans regarding COG terms coupling on an ortholog level with the COG term energy production and conversion, and number of such genes reported in scientific literature in the context of cooperation (synergism, consortium, community, cooperation) or specific utilization (leaching, bioleaching, chalcopyrite)