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Table 1 Compare IMP-WFDR and FDR method in zebrafish experiment

From: Testing multiple hypotheses through IMP weighted FDR based on a genetic functional network with application to a new zebrafish transcriptome study

Arsenic 0 vs 10 ppb for PBS samples at 6H

Arsenic 0 vs 10 ppb for P. aeruginosa at 6H

PBS vs P. aeruginosa for Arsenic=0 ppb at 12H

PBS vs P. aeruginosa for Arsenic=10 ppb at 6H

IMP-WFDR

FDR

IMP-WFDR

FDR

IMP-WFDR

FDR

IMP-WFDR

FDR

116 (143)

25

121 (129)

10

157 (167)

1

12 (9)

35

  1. The numbers in bracket is the result from sensitivity analysis that set the weight for all query genes to 1
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BioData Mining

ISSN: 1756-0381