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Table 2 SNPs used to calculate the genetic risk score for HDL-C in African Americans

From: The effects of electronic medical record phenotyping details on genetic association studies: HDL-C as a case study

SNP

Gene of interest

Effect Allele

Effect on HDL-Cā€ (mg/dl)

rs247617

CETP

C

āˆ’0.111

rs1077834

LIPC

A

āˆ’0.033

rs10096633

LPL

G

āˆ’0.042

rs189069311

APOA5

A

āˆ’0.080

rs255054

LCAT

A

āˆ’0.042

rs6601299

PPP1R3B

A

āˆ’0.063

rs4810479

PLTP

G

āˆ’0.029

  1. ā€ Beta coefficients were drawn from meta-analysis results of PAGE African Americans [23].
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BioData Mining

ISSN: 1756-0381