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Table 4 Performances of APCpred, Bayesb, AAP, and the combination method of AAP and AP models on testing with Chen872 dataset using fivefold cross-validation

From: Predicting linear B-cell epitopes using amino acid anchoring pair composition

Methods

ACC(%)

Sen(%)

Spe(%)

MCC

AUC

APCpred

72.94

69.95

75.92

0.460

0.809

Bayesb

68.50

70.00

67.00

-

0.74

AAP

71.09

60.87

75.36

0.366

-

AAP + AP

72.54

63.56

76.48

0.404

-

  1. “-” denotes unknown information.
  2. “AAP + AP” is Chen’s combination method of AAP and five APs.
  3. The bold denotes the largest ACC value of the prediction.