Expression measurement | Area of SNPs | Group | Number of significant correlation pairs/number of all pairs | Number of unique genes/transcripts/exons affected | Number of unique genes | Number of correlating SNPs inside/outside gene/transcript/exon regions |
---|---|---|---|---|---|---|
Gene | gene5000bp | hiPSC | 0/100363 | - | - | -/- |
Gene | gene5000bp | hESC | 206/129416 | 56 | 56 | 190/16 |
Gene | gene5000bp | All | 27/149986 | 20 | 20 | 22/5 |
Transcript | Transcript | hiPSC | 5/197884 | 5 | 1 | 5/- |
Transcript | Transcript | hESC | 1/231846 | 1 | 1 | 1/- |
Transcript | Transcript | All | 22/296333 | 20 | 8 | 22/- |
Exon | Short | hiPSC | 0/75180 | - | - | -/- |
Exon | Short | hESC | 0/95038 | - | - | -/- |
Exon | Short | All | 53/113050 | 42 | 35 | 4/49 |
Exon | Long | hiPSC | 0/821655 | - | - | -/- |
Exon | Long | hESC | 0/955091 | - | - | -/- |
Exon | Long | All | 651/1230955 | 342 | 159 | 4/647 |