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Table 2 Classic, fully penetrant 2-locus model of pure epistasis

From: A classification and characterization of two-locus, pure, strict, epistatic models for simulation and detection

   SNP 2 Marginal
  Genotype BB (.25) Bb (.5) bb (.25) Penetrance
  AA (.25) 0 1 0 .5
SNP 1 Aa (.5) 1 0 1 .5
  aa (.25) 0 1 0 .5
  Marginal .5 .5 .5 K =.5
  Penetrance