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Figure 10 | BioData Mining

Figure 10

From: Mycoplasma contamination in the 1000 Genomes Project

Figure 10

Speed of Bowtie mapping short nextGen DNA sequences from The 1000 Genomes Project against 30 Mycoplasma genomes (Additional file 1: Table S1). As expected, Bowtie is typically about twice as fast on single ended (× and □) compared to paired end DNA sequences (+ and *). For the colorspace DNA sequences (* and □) Bowtie uses a colorspace version of its EBWT indexes. Bowtie run on a 32 GB 8 core 3 GHz server. Note log horizontal scale.

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BioData Mining

ISSN: 1756-0381