Accurate prediction of major histocompatibility complex class II epitopes by sparse representation via ℓ 1-minimization

Table 1 Peptide sequences and their binding affinities

	I C ₅₀cuttoff	100	300	500	1000	5000	10000	15000
	Bind	49	93	112	153	233	285	321
H2-IA^b	Non-bind	485	441	422	381	301	249	213
	Total	534	534	534	534	534	534	534
	Bind	34	43	52	56	68	70	79
H2-IA^d	Non-bind	214	205	196	192	180	178	169
	Total	248	248	248	248	248	248	248
HLA-DPA1*0103/	Bind	32	53	67	92	149	171	175
DPB1*0201	Non-bind	264	243	229	204	147	125	121
DPB1*0201	Total	296	296	296	296	296	296	296
	Bind	2253	2988	3326	3799	4503	4783	4924
HLA-DRB1*0101	Non-bind	3095	2360	2022	1549	845	565	424
	Total	5348	5348	5348	5348	5348	5348	5348
	Bind	58	87	102	139	196	210	270
HLA-DRB1*0401	Non-bind	252	223	208	171	114	100	40
	Total	310	310	310	310	310	310	310

ISSN: 1756-0381