From: Unraveling genomic variation from next generation sequencing data
Tool | Annotation | Data support |
---|---|---|
Annotate-it [76] | SNPs, miRNA, Gene, Custom | OMIM, dbSNP, 200 Danish genomes, NHLBI Exomes, 1000 Genomes |
KGGSeq [77] | Indels, SNPs, Gene | dbSNP, 1000 Genomes |
ANNOVAR [78] | Indels, SNPs, miRNAs, Gene, Custom | dbSNP, NHLBI Exomes, 1000 Genomes |
Anntools [79] | Indels, SNPs, miRNAs, Gene, Custom | dbSNP, 1000 Genomes |
SeqAnt [80] | Indels, SNPs, Gene | dbSNP, 1000 Genomes |
SVA [81] | Indels, SNPs, Gene, Custom | OMIM, dbSNP, 1000 Genomes |
TREAT [82] | Indels, SNPs, Gene | OMIM, dbSNP, 1000 Genomes |
VAAST [83] | Indels, SNPs | - |
VarioWatch [84] | SNPs, Gene | OMIM, dbSNP, 1000 Genomes |
Var-MD [85] | SNPs | - |
VarSifter [86] | Indels, SNPs | - |