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Table 4 2x2 contingency table of the number of genes in different classes for gene set overrepresentation in a list of differentially expressed genes

From: Mining SOM expression portraits: feature selection and integrating concepts of molecular function

# of genes in list not in list total
in set N+ Nset- N+ Nset
not in set Nlist- N+ N- (Nlist + Nset) + N+ N- Nset
total Nlist N- Nlist N