From: GAMETES: a fast, direct algorithm for generating pure, strict, epistatic models with random architectures
SNP 2
Marginal
Genotype
BB(.25)
Bb (.5)
bb(.25)
penetrance
AA(.36)
.266
.764
.664
.614
SNP 1
Aa (.48)
.928
.398
.733
aa(.16)
.456
.927
.147
K = .614
Penetrance