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Table 11 Top 20 Variables deemed necessary by the SVM-RFE to predict S O-glycosylated Sites

From: Logic minimization and rule extraction for identification of functional sites in molecular sequences

Ranking

Variable

Meaning

1

183

Amino Acid in Position 3 is/is not P

2

101

Amino Acid in Position −1 is/is not T

3

143

Amino Acid in Position 1 is/is not T

4

204

Amino Acid in Position 4 is/is not P

5

99

Amino Acid in Position −1 is/is not P

6

185

Amino Acid in Position 3 is/is not T

7

206

Amino Acid in Position 4 is/is not T

8

163

Amino Acid in Position 2 is/is not S

9

88

Amino Acid in Position −1 is/is not D

10

36

Amino Acid in Position −4 is/is not P

11

180

Amino Acid in Position 3 is/is not K

12

100

Amino Acid in Position −1 is/is not S

13

2

Amino Acid in Position −5 is/is not R

14

162

Amino Acid in Position 2 is/is not P

15

227

Amino Acid in Position 5 is/is not T

16

78

Amino Acid in Position −2 is/is not P

17

142

Amino Acid in Position 1 is/is not S

18

164

Amino Acid in Position 2 is/is not T

19

74

Amino Acid in Position −2 is/is not L

20

148

Amino Acid in Position 2 is/is not A