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Table 1 Tools for ranking biomedical literature using document sets

From: Caipirini: using gene sets to rank literature

Tool Input Dictionary Method
  Sets Genes   
Kleio [14] 1 Yes ~2 million entities VSM score
PubFinder [5] 1 No ~100,000 words from Medline Likelihood
MScanner [6] 1 No ~25,000 MeSH terms Bayesian
MedlineRanker [7] 1 or 2 No Detects nouns via syntax Bayesian
Caipirini 2 Yes ~4 million entities SVM