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Table 1 Accuracy of the AGEP method to find a priori known annotation class as primary hit in leave-one-out cross validation of the entire reference database against itself and accuracy of the SVM to find a priori known annotation class in 10-fold cross-validation of the entire reference database

From: Alignment of gene expression profiles from test samples against a reference database: New method for context-specific interpretation of microarray data

 

AGEP Accuracy

Nearest-neighbour (correlation)

SVM Accuracy

Max

100%

100%

100%

75% percentile

100%

100%

100%

Median

96.4%

93.7%

96.7%

Mean

93.7%

90.7%

90.4%

25% percentile

90.3%

81.5%

91.7%

Min

58.3%

69.2%

9.1%

Overall

93.6%

90.2%

94.4%