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Table 1 Accuracy of the AGEP method to find a priori known annotation class as primary hit in leave-one-out cross validation of the entire reference database against itself and accuracy of the SVM to find a priori known annotation class in 10-fold cross-validation of the entire reference database

From: Alignment of gene expression profiles from test samples against a reference database: New method for context-specific interpretation of microarray data

  AGEP Accuracy Nearest-neighbour (correlation) SVM Accuracy
Max 100% 100% 100%
75% percentile 100% 100% 100%
Median 96.4% 93.7% 96.7%
Mean 93.7% 90.7% 90.4%
25% percentile 90.3% 81.5% 91.7%
Min 58.3% 69.2% 9.1%
Overall 93.6% 90.2% 94.4%