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Table 2 Broad Dataset with Flanking Positions Identified as either purine or pyrimidine

From: Multifactor dimensionality reduction analysis identifies specific nucleotide patterns promoting genetic polymorphisms

SNP Count nucleotide positions Testing accuracy P-value X 2
G→A 322 +1 0.571 0.02 0.001
T→C 371 +2 0.536 <0.01 0.001
T→G 87 -2, +2 0.621 0.02 0.001
  1. MDR analysis of SNP flanking regions where upstream 3' to SNP site equals positions -10 through -1 and 5' region from the SNP site extending downstream equals position +1 through +10. All positions were evaluated with regard to pyrimidine or purine identity.