TY - JOUR AU - Stoneking, M. PY - 2001 DA - 2001// TI - Single nucleotide polymorphisms. From the evolutionary past JO - Nature VL - 409 UR - https://doi.org/10.1038/35057279 DO - 10.1038/35057279 ID - Stoneking2001 ER - TY - JOUR AU - Watson, J. D. AU - Crick, F. H. PY - 1953 DA - 1953// TI - Molecular structure of nucleic acids; a structure for deoxyribose nucleic acid JO - Nature VL - 171 UR - https://doi.org/10.1038/171737a0 DO - 10.1038/171737a0 ID - Watson1953 ER - TY - JOUR AU - Kunkel, T. A. AU - Bebenek, K. PY - 2000 DA - 2000// TI - DNA replication fidelity JO - Annu Rev Biochem VL - 69 UR - https://doi.org/10.1146/annurev.biochem.69.1.497 DO - 10.1146/annurev.biochem.69.1.497 ID - Kunkel2000 ER - TY - JOUR AU - Engel, J. D. AU - von Hippel, P. H. PY - 1978 DA - 1978// TI - Effects of methylation on the stability of nucleic acid conformations. Studies at the polymer level JO - J Biol Chem VL - 253 ID - Engel1978 ER - TY - JOUR AU - Lewis, D. A. AU - Bebenek, K. AU - Beard, W. A. AU - Wilson, S. H. AU - Kunkel, T. A. PY - 1999 DA - 1999// TI - Uniquely altered DNA replication fidelity conferred by an amino acid change in the nucleotide binding pocket of human immunodeficiency virus type 1 reverse transcriptase JO - J Biol Chem VL - 274 UR - https://doi.org/10.1074/jbc.274.46.32924 DO - 10.1074/jbc.274.46.32924 ID - Lewis1999 ER - TY - JOUR AU - Arndt, J. W. AU - Gong, W. AU - Zhong, X. AU - Showalter, A. K. AU - Liu, J. AU - Dunlap, C. A. AU - Lin, Z. AU - Paxson, C. AU - Tsai, M. D. AU - Chan, M. K. PY - 2001 DA - 2001// TI - Insight into the catalytic mechanism of DNA polymerase beta: structures of intermediate complexes JO - Biochemistry VL - 40 UR - https://doi.org/10.1021/bi002176j DO - 10.1021/bi002176j ID - Arndt2001 ER - TY - JOUR AU - Beard, W. A. AU - Shock, D. D. AU - Vande Berg, B. J. AU - Wilson, S. H. PY - 2002 DA - 2002// TI - Efficiency of correct nucleotide insertion governs DNA polymerase fidelity JO - J Biol Chem VL - 277 UR - https://doi.org/10.1074/jbc.M210036200 DO - 10.1074/jbc.M210036200 ID - Beard2002 ER - TY - JOUR AU - Yang, L. AU - Arora, K. AU - Beard, W. A. AU - Wilson, S. H. AU - Schlick, T. PY - 2004 DA - 2004// TI - Critical role of magnesium ions in DNA polymerase beta's closing and active site assembly JO - J Am Chem Soc VL - 126 UR - https://doi.org/10.1021/ja049412o DO - 10.1021/ja049412o ID - Yang2004 ER - TY - JOUR AU - Beard, W. A. AU - Wilson, S. H. PY - 1998 DA - 1998// TI - Structural insights into DNA polymerase beta fidelity: hold tight if you want it right JO - Chem Biol VL - 5 UR - https://doi.org/10.1016/S1074-5521(98)90081-3 DO - 10.1016/S1074-5521(98)90081-3 ID - Beard1998 ER - TY - JOUR AU - Sawaya, M. R. AU - Prasad, R. AU - Wilson, S. H. AU - Kraut, J. AU - Pelletier, H. PY - 1997 DA - 1997// TI - Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism JO - Biochemistry VL - 36 UR - https://doi.org/10.1021/bi9703812 DO - 10.1021/bi9703812 ID - Sawaya1997 ER - TY - JOUR AU - Ollis, D. L. AU - Brick, P. AU - Hamlin, R. AU - Xuong, N. G. AU - Steitz, T. A. PY - 1985 DA - 1985// TI - Structure of large fragment of Escherichia coli DNA polymerase I complexed with dTMP JO - Nature VL - 313 UR - https://doi.org/10.1038/313762a0 DO - 10.1038/313762a0 ID - Ollis1985 ER - TY - JOUR AU - Osheroff, W. P. AU - Beard, W. A. AU - Yin, S. AU - Wilson, S. H. AU - Kunkel, T. A. PY - 2000 DA - 2000// TI - Minor groove interactions at the DNA polymerase beta active site modulate single-base deletion error rates JO - J Biol Chem VL - 275 ID - Osheroff2000 ER - TY - JOUR AU - Beard, W. A. AU - Shock, D. D. AU - Yang, X. P. AU - DeLauder, S. F. AU - Wilson, S. H. PY - 2002 DA - 2002// TI - Loss of DNA polymerase beta stacking interactions with templating purines, but not pyrimidines, alters catalytic efficiency and fidelity JO - J Biol Chem VL - 277 UR - https://doi.org/10.1074/jbc.M107286200 DO - 10.1074/jbc.M107286200 ID - Beard2002 ER - TY - JOUR AU - Osheroff, W. P. AU - Beard, W. A. AU - Wilson, S. H. AU - Kunkel, T. A. PY - 1999 DA - 1999// TI - Base substitution specificity of DNA polymerase beta depends on interactions in the DNA minor groove JO - J Biol Chem VL - 274 UR - https://doi.org/10.1074/jbc.274.30.20749 DO - 10.1074/jbc.274.30.20749 ID - Osheroff1999 ER - TY - JOUR AU - Ahn, J. AU - Werneburg, B. G. AU - Tsai, M. D. PY - 1997 DA - 1997// TI - DNA polymerase beta: structure-fidelity relationship from Pre-steady-state kinetic analyses of all possible correct and incorrect base pairs for wild type and R283A mutant JO - Biochemistry VL - 36 UR - https://doi.org/10.1021/bi961653o DO - 10.1021/bi961653o ID - Ahn1997 ER - TY - JOUR AU - Beard, W. A. AU - Osheroff, W. P. AU - Prasad, R. AU - Sawaya, M. R. AU - Jaju, M. AU - Wood, T. G. AU - Kraut, J. AU - Kunkel, T. A. AU - Wilson, S. H. PY - 1996 DA - 1996// TI - Enzyme-DNA interactions required for efficient nucleotide incorporation and discrimination in human DNA polymerase beta JO - J Biol Chem VL - 271 UR - https://doi.org/10.1074/jbc.271.21.12141 DO - 10.1074/jbc.271.21.12141 ID - Beard1996 ER - TY - JOUR AU - Zhao, Z. AU - Boerwinkle, E. PY - 2002 DA - 2002// TI - Neighboring-nucleotide effects on single nucleotide polymorphisms: a study of 2.6 million polymorphisms across the human genome JO - Genome Res VL - 12 UR - https://doi.org/10.1101/gr.287302 DO - 10.1101/gr.287302 ID - Zhao2002 ER - TY - JOUR AU - Zhao, Z. AU - Zhang, F. PY - 2006 DA - 2006// TI - Sequence context analysis in the mouse genome: single nucleotide polymorphisms and CpG island sequences JO - Genomics VL - 87 UR - https://doi.org/10.1016/j.ygeno.2005.09.012 DO - 10.1016/j.ygeno.2005.09.012 ID - Zhao2006 ER - TY - JOUR AU - Ritchie, M. D. AU - Hahn, L. W. AU - Roodi, N. AU - Bailey, L. R. AU - Dupont, W. D. AU - Parl, F. F. AU - Moore, J. H. PY - 2001 DA - 2001// TI - Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer JO - Am J Hum Genet VL - 69 UR - https://doi.org/10.1086/321276 DO - 10.1086/321276 ID - Ritchie2001 ER - TY - JOUR AU - Ritchie, M. D. AU - Hahn, L. W. AU - Moore, J. H. PY - 2003 DA - 2003// TI - Power of multifactor dimensionality reduction for detecting gene-gene interactions in the presence of genotyping error, missing data, phenocopy, and genetic heterogeneity JO - Genet Epidemiol VL - 24 UR - https://doi.org/10.1002/gepi.10218 DO - 10.1002/gepi.10218 ID - Ritchie2003 ER - TY - JOUR AU - Hahn, L. W. AU - Ritchie, M. D. AU - Moore, J. H. PY - 2003 DA - 2003// TI - Multifactor dimensionality reduction software for detecting gene-gene and gene-environment interactions JO - Bioinformatics VL - 19 UR - https://doi.org/10.1093/bioinformatics/btf869 DO - 10.1093/bioinformatics/btf869 ID - Hahn2003 ER - TY - JOUR AU - Hahn, L. W. AU - Moore, J. H. PY - 2004 DA - 2004// TI - Ideal discrimination of discrete clinical endpoints using multilocus genotypes JO - In Silico Biol VL - 4 ID - Hahn2004 ER - TY - JOUR AU - Moore, J. H. AU - Gilbert, J. C. AU - Tsai, C. T. AU - Chiang, F. T. AU - Holden, T. AU - Barney, N. AU - White, B. C. PY - 2006 DA - 2006// TI - A flexible computational framework for detecting, characterizing, and interpreting statistical patterns of epistasis in genetic studies of human disease susceptibility JO - J Theor Biol VL - 241 UR - https://doi.org/10.1016/j.jtbi.2005.11.036 DO - 10.1016/j.jtbi.2005.11.036 ID - Moore2006 ER - TY - JOUR AU - Michalski, R. S. AU - Baskin, A. B. AU - Spackman, K. A. PY - 1983 DA - 1983// TI - A logic-based approach to conceptual data base analysis JO - Med Inform (Lond) VL - 8 UR - https://doi.org/10.3109/14639238309016082 DO - 10.3109/14639238309016082 ID - Michalski1983 ER - TY - JOUR AU - Martin, E. R. AU - Ritchie, M. D. AU - Hahn, L. AU - Kang, S. AU - Moore, J. H. PY - 2006 DA - 2006// TI - A novel method to identify gene-gene effects in nuclear families: the MDR-PDT JO - Genet Epidemiol VL - 30 UR - https://doi.org/10.1002/gepi.20128 DO - 10.1002/gepi.20128 ID - Martin2006 ER - TY - JOUR AU - Velez, S. AU - Feder, J. L. PY - 2006 DA - 2006// TI - Integrating biogeographic and genetic approaches to investigate the history of bioluminescent colour alleles in the Jamaican click beetle, Pyrophorus plagiophthalamus JO - Mol Ecol VL - 15 UR - https://doi.org/10.1111/j.1365-294X.2005.02793.x DO - 10.1111/j.1365-294X.2005.02793.x ID - Velez2006 ER - TY - JOUR AU - Tippin, B. AU - Kobayashi, S. AU - Bertram, J. G. AU - Goodman, M. F. PY - 2004 DA - 2004// TI - To slip or skip, visualizing frameshift mutation dynamics for error-prone DNA polymerases JO - J Biol Chem VL - 279 UR - https://doi.org/10.1074/jbc.M408600200 DO - 10.1074/jbc.M408600200 ID - Tippin2004 ER - TY - JOUR AU - Efrati, E. AU - Tocco, G. AU - Eritja, R. AU - Wilson, S. H. AU - Goodman, M. F. PY - 1997 DA - 1997// TI - Abasic translesion synthesis by DNA polymerase beta violates the "A-rule". Novel types of nucleotide incorporation by human DNA polymerase beta at an abasic lesion in different sequence contexts JO - J Biol Chem VL - 272 UR - https://doi.org/10.1074/jbc.272.4.2559 DO - 10.1074/jbc.272.4.2559 ID - Efrati1997 ER -