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Table 3 Number of AIMs and percentage with delta ≥ 0.3 (in parentheses) for HapMap, Affymetrix, Illumina and AIM databases.

From: Database mining for selection of SNP markers useful in admixture mapping

  HapMap SNPs Affymerix SNPs Illumina SNPs AIM SNPs
Chr Total delta (%) Total delta (%) Total delta (%) Total delta (%)
1 270009 36255 (13) 39418 4439 (11) 9820 1471 (15) 235 235 (100)
2 293090 46551 (16) 40633 4649 (11) 8702 1280(15) 217 217(100)
3 225937 35394 (16) 33120 3779 (11) 7207 1021(14) 178 178(100)
4 214465 33242 (16) 31339 3449 (11) 6000 929(15) 124 124(100)
5 221858 31821 (14) 31595 3245 (10) 6329 879(14) 129 129(100)
6 244251 32121 (13) 31130 3126 (10) 6579 894(14) 184 184(100)
7 182354 26745 (15) 25407 2785 (11) 5581 826(15) 121 121(100)
8 192846 32106 (17) 26948 3142 (12) 4891 751(15) 122 122(100)
9 162192 23800 (15) 22596 2447 (11) 4480 585(13) 108 108(100)
10 189583 26671 (14) 28217 3005 (11) 5240 784(15) 135 135(100)
11 180434 23850 (13) 28217 2767 (11) 5240 863(15) 154 154(100)
12 169898 23058 (14) 25998 2672 (11) 5928 768(14) 125 125(100)
13 142568 18327 (13) 24712 1909 (10) 5465 399(13) 71 71(100)
14 110229 16581 (15) 18910 1667 (11) 3093 499(15) 88 88(100)
15 95436 16511 (17) 15432 1778 (13) 3420 533(16) 83 83(100)
16 96742 14331 (15) 14190 1741(12) 3307 536(16) 95 95(100)
17 79038 12212 (16) 15069 1342(12) 3388 626(15) 115 115(100)
18 107243 15605 (15) 11127 1613(11) 4079 354(14) 79 79(100)
19 48447 6970 (14) 14631 620(10) 2570 439(12) 102 102(100)
20 108979 12941 (12) 6284 1357(11) 3520 431(14) 80 80(100)
21 43739 6775 (16) 12266 772(11) 3007 169(12) 54 54(100)
22 49009 6419 (13) 7014 620(10) 1381 304(16) 88 88(100)
X 102866 23368 (23) 6123 1867(18) 1886 640(18) 156 156(100)
Y 55 11 (20) - - - - - -
  1. Chr = chromosome