From: Database mining for selection of SNP markers useful in admixture mapping
 | HapMap SNPs | Affymerix SNPs | Illumina SNPs | AIM SNPs | ||||
---|---|---|---|---|---|---|---|---|
Chr | Total | delta (%) | Total | delta (%) | Total | delta (%) | Total | delta (%) |
1 | 270009 | 36255 (13) | 39418 | 4439 (11) | 9820 | 1471 (15) | 235 | 235 (100) |
2 | 293090 | 46551 (16) | 40633 | 4649 (11) | 8702 | 1280(15) | 217 | 217(100) |
3 | 225937 | 35394 (16) | 33120 | 3779 (11) | 7207 | 1021(14) | 178 | 178(100) |
4 | 214465 | 33242 (16) | 31339 | 3449 (11) | 6000 | 929(15) | 124 | 124(100) |
5 | 221858 | 31821 (14) | 31595 | 3245 (10) | 6329 | 879(14) | 129 | 129(100) |
6 | 244251 | 32121 (13) | 31130 | 3126 (10) | 6579 | 894(14) | 184 | 184(100) |
7 | 182354 | 26745 (15) | 25407 | 2785 (11) | 5581 | 826(15) | 121 | 121(100) |
8 | 192846 | 32106 (17) | 26948 | 3142 (12) | 4891 | 751(15) | 122 | 122(100) |
9 | 162192 | 23800 (15) | 22596 | 2447 (11) | 4480 | 585(13) | 108 | 108(100) |
10 | 189583 | 26671 (14) | 28217 | 3005 (11) | 5240 | 784(15) | 135 | 135(100) |
11 | 180434 | 23850 (13) | 28217 | 2767 (11) | 5240 | 863(15) | 154 | 154(100) |
12 | 169898 | 23058 (14) | 25998 | 2672 (11) | 5928 | 768(14) | 125 | 125(100) |
13 | 142568 | 18327 (13) | 24712 | 1909 (10) | 5465 | 399(13) | 71 | 71(100) |
14 | 110229 | 16581 (15) | 18910 | 1667 (11) | 3093 | 499(15) | 88 | 88(100) |
15 | 95436 | 16511 (17) | 15432 | 1778 (13) | 3420 | 533(16) | 83 | 83(100) |
16 | 96742 | 14331 (15) | 14190 | 1741(12) | 3307 | 536(16) | 95 | 95(100) |
17 | 79038 | 12212 (16) | 15069 | 1342(12) | 3388 | 626(15) | 115 | 115(100) |
18 | 107243 | 15605 (15) | 11127 | 1613(11) | 4079 | 354(14) | 79 | 79(100) |
19 | 48447 | 6970 (14) | 14631 | 620(10) | 2570 | 439(12) | 102 | 102(100) |
20 | 108979 | 12941 (12) | 6284 | 1357(11) | 3520 | 431(14) | 80 | 80(100) |
21 | 43739 | 6775 (16) | 12266 | 772(11) | 3007 | 169(12) | 54 | 54(100) |
22 | 49009 | 6419 (13) | 7014 | 620(10) | 1381 | 304(16) | 88 | 88(100) |
X | 102866 | 23368 (23) | 6123 | 1867(18) | 1886 | 640(18) | 156 | 156(100) |
Y | 55 | 11 (20) | - | - | - | - | - | - |